Assessment Score
Here is the result of YMF in the motifi-finding assessment.
| Data set | nTP | nFP | nFN | nTN | sTP | sFP | sFN | | nSn | nPPV | nSp | nPC | nCC | sSn | sPPV | sASP |
|---|
| dm01g | 0 | 50 | 125 | 5825 | 0 | 8 | 7 | | 0 | 0 | 0.9914894 | 0 | -0.0133714 | 0 | 0 | 0
|
|---|
| dm02r | 0 | 40 | 49 | 1911 | 0 | 6 | 5 | | 0 | 0 | 0.9794977 | 0 | -0.0226397 | 0 | 0 | 0
|
|---|
| dm03m | 0 | 28 | 104 | 5868 | 0 | 4 | 9 | | 0 | 0 | 0.995251 | 0 | -0.009094 | 0 | 0 | 0
|
|---|
| dm04g | 0 | 77 | 135 | 7788 | 0 | 11 | 9 | | 0 | 0 | 0.9902098 | 0 | -0.0129157 | 0 | 0 | 0
|
|---|
| dm05g | 0 | 113 | 160 | 7227 | 0 | 17 | 14 | | 0 | 0 | 0.9846049 | 0 | -0.0182607 | 0 | 0 | 0
|
|---|
| dm06r | 0 | 38 | 98 | 2864 | 0 | 6 | 7 | | 0 | 0 | 0.9869056 | 0 | -0.0208144 | 0 | 0 | 0
|
|---|
| dm07m | 0 | 59 | 0 | 4441 | 0 | 10 | 0 | | NaN | 0 | 0.9868889 | 0 | NaN | NaN | 0 | NaN
|
|---|
| dm08m | 0 | 107 | 0 | 5893 | 0 | 17 | 0 | | NaN | 0 | 0.9821667 | 0 | NaN | NaN | 0 | NaN
|
|---|
| hm01g | 0 | 144 | 236 | 35620 | 0 | 18 | 16 | | 0 | 0 | 0.9959736 | 0 | -0.0051479 | 0 | 0 | 0
|
|---|
| hm02r | 7 | 84 | 250 | 8659 | 0 | 13 | 11 | | 0.0272374 | 0.0769231 | 0.9903923 | 0.0205279 | 0.0293498 | 0 | 0 | 0
|
|---|
| hm03r | 0 | 172 | 408 | 14420 | 0 | 25 | 15 | | 0 | 0 | 0.9882127 | 0 | -0.0180092 | 0 | 0 | 0
|
|---|
| hm04m | 0 | 0 | 168 | 25832 | 0 | 0 | 11 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| hm05r | 0 | 79 | 193 | 2728 | 0 | 8 | 11 | | 0 | 0 | 0.9718561 | 0 | -0.0431226 | 0 | 0 | 0
|
|---|
| hm06g | 0 | 302 | 75 | 4123 | 0 | 24 | 9 | | 0 | 0 | 0.9317514 | 0 | -0.0349186 | 0 | 0 | 0
|
|---|
| hm07m | 14 | 76 | 113 | 4797 | 2 | 12 | 4 | | 0.1102362 | 0.1555556 | 0.9844039 | 0.0689655 | 0.1119987 | 0.3333333 | 0.1428571 | 0.2380952
|
|---|
| hm08m | 68 | 20 | 122 | 7290 | 7 | 5 | 6 | | 0.3578947 | 0.7727273 | 0.997264 | 0.3238095 | 0.5182615 | 0.5384615 | 0.5833333 | 0.5608974
|
|---|
| hm09g | 0 | 84 | 160 | 14756 | 0 | 12 | 10 | | 0 | 0 | 0.9943396 | 0 | -0.0077921 | 0 | 0 | 0
|
|---|
| hm10m | 2 | 22 | 87 | 2889 | 0 | 3 | 11 | | 0.0224719 | 0.0833333 | 0.9924425 | 0.018018 | 0.0284053 | 0 | 0 | 0
|
|---|
| hm11g | 0 | 42 | 269 | 7689 | 0 | 6 | 19 | | 0 | 0 | 0.9945673 | 0 | -0.0135513 | 0 | 0 | 0
|
|---|
| hm12r | 9 | 28 | 61 | 902 | 1 | 6 | 4 | | 0.1285714 | 0.2432432 | 0.9698925 | 0.0918367 | 0.1330925 | 0.2 | 0.1428571 | 0.1714286
|
|---|
| hm13r | 13 | 70 | 151 | 5766 | 2 | 11 | 7 | | 0.0792683 | 0.1566265 | 0.9880055 | 0.0555556 | 0.0939151 | 0.2222222 | 0.1538462 | 0.1880342
|
|---|
| hm14r | 7 | 22 | 75 | 1896 | 1 | 4 | 3 | | 0.0853659 | 0.2413793 | 0.9885297 | 0.0673077 | 0.1225765 | 0.25 | 0.2 | 0.225
|
|---|
| hm15r | 0 | 72 | 90 | 7838 | 0 | 9 | 4 | | 0 | 0 | 0.9908976 | 0 | -0.0101652 | 0 | 0 | 0
|
|---|
| hm16g | 0 | 184 | 164 | 20652 | 0 | 23 | 7 | | 0 | 0 | 0.9911691 | 0 | -0.0083411 | 0 | 0 | 0
|
|---|
| hm17g | 54 | 0 | 91 | 5355 | 6 | 0 | 4 | | 0.3724138 | 1 | 1 | 0.3724138 | 0.6051371 | 0.6 | 1 | 0.8
|
|---|
| hm18m | 0 | 24 | 88 | 14888 | 0 | 3 | 7 | | 0 | 0 | 0.9983906 | 0 | -0.0030753 | 0 | 0 | 0
|
|---|
| hm19g | 0 | 0 | 87 | 2413 | 0 | 0 | 4 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| hm20r | 0 | 336 | 1306 | 70358 | 0 | 42 | 76 | | 0 | 0 | 0.9952471 | 0 | -0.0093068 | 0 | 0 | 0
|
|---|
| hm21g | 0 | 0 | 93 | 4907 | 0 | 0 | 7 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| hm22m | 24 | 18 | 82 | 2876 | 2 | 5 | 3 | | 0.2264151 | 0.5714286 | 0.9937802 | 0.1935484 | 0.3460083 | 0.4 | 0.2857143 | 0.3428571
|
|---|
| hm23r | 12 | 112 | 131 | 1745 | 1 | 13 | 4 | | 0.0839161 | 0.0967742 | 0.9396877 | 0.0470588 | 0.025219 | 0.2 | 0.0714286 | 0.1357143
|
|---|
| hm24m | 0 | 42 | 92 | 3866 | 0 | 6 | 8 | | 0 | 0 | 0.9892528 | 0 | -0.0158053 | 0 | 0 | 0
|
|---|
| hm25g | 0 | 28 | 70 | 902 | 0 | 4 | 5 | | 0 | 0 | 0.9698925 | 0 | -0.0465643 | 0 | 0 | 0
|
|---|
| hm26m | 0 | 0 | 247 | 8753 | 0 | 0 | 10 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| mus01r | 0 | 32 | 85 | 1383 | 0 | 4 | 6 | | 0 | 0 | 0.9773852 | 0 | -0.0361862 | 0 | 0 | 0
|
|---|
| mus02r | 5 | 79 | 227 | 8689 | 1 | 11 | 11 | | 0.0215517 | 0.0595238 | 0.99099 | 0.0160772 | 0.0206693 | 0.0833333 | 0.0833333 | 0.0833333
|
|---|
| mus03g | 0 | 0 | 142 | 2358 | 0 | 0 | 9 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| mus04m | 14 | 74 | 250 | 6662 | 1 | 15 | 13 | | 0.0530303 | 0.1590909 | 0.9890143 | 0.0414201 | 0.0718902 | 0.0714286 | 0.0625 | 0.0669643
|
|---|
| mus05r | 11 | 182 | 77 | 1730 | 1 | 14 | 5 | | 0.125 | 0.0569948 | 0.9048117 | 0.0407407 | 0.0207069 | 0.1666667 | 0.0666667 | 0.1166667
|
|---|
| mus06g | 0 | 24 | 67 | 1409 | 0 | 3 | 5 | | 0 | 0 | 0.9832519 | 0 | -0.0275725 | 0 | 0 | 0
|
|---|
| mus07g | 0 | 42 | 100 | 5858 | 0 | 6 | 4 | | 0 | 0 | 0.9928814 | 0 | -0.0109307 | 0 | 0 | 0
|
|---|
| mus08m | 0 | 0 | 41 | 4459 | 0 | 0 | 3 | | 0 | NaN | 1 | 0 | NaN | 0 | NaN | NaN
|
|---|
| mus09r | 0 | 16 | 41 | 943 | 0 | 2 | 2 | | 0 | 0 | 0.983316 | 0 | -0.026366 | 0 | 0 | 0
|
|---|
| mus10g | 73 | 119 | 150 | 12658 | 9 | 19 | 6 | | 0.3273543 | 0.3802083 | 0.9906864 | 0.2134503 | 0.3423405 | 0.6 | 0.3214286 | 0.4607143
|
|---|
| mus11m | 63 | 66 | 148 | 5723 | 8 | 11 | 7 | | 0.2985782 | 0.4883721 | 0.9885991 | 0.2274368 | 0.3647054 | 0.5333333 | 0.4210526 | 0.477193
|
|---|
| mus12m | 0 | 23 | 145 | 1332 | 0 | 5 | 7 | | 0 | 0 | 0.9830258 | 0 | -0.0408214 | 0 | 0 | 0
|
|---|
| yst01g | 5 | 188 | 117 | 8690 | 1 | 16 | 6 | | 0.0409836 | 0.0259067 | 0.9788241 | 0.016129 | 0.0158117 | 0.1428571 | 0.0588235 | 0.1008403
|
|---|
| yst02g | 51 | 0 | 57 | 1892 | 3 | 0 | 2 | | 0.4722222 | 1 | 1 | 0.4722222 | 0.6770611 | 0.6 | 1 | 0.8
|
|---|
| yst03m | 42 | 18 | 105 | 3835 | 6 | 4 | 12 | | 0.2857143 | 0.7 | 0.9953283 | 0.2545455 | 0.4350174 | 0.3333333 | 0.6 | 0.4666667
|
|---|
| yst04r | 0 | 24 | 131 | 5845 | 0 | 3 | 7 | | 0 | 0 | 0.9959107 | 0 | -0.0094679 | 0 | 0 | 0
|
|---|
| yst05r | 0 | 24 | 72 | 1404 | 0 | 3 | 4 | | 0 | 0 | 0.9831933 | 0 | -0.0286329 | 0 | 0 | 0
|
|---|
| yst06g | 38 | 0 | 122 | 3340 | 5 | 0 | 2 | | 0.2375 | 1 | 1 | 0.2375 | 0.4786758 | 0.7142857 | 1 | 0.8571429
|
|---|
| yst07m | 0 | 24 | 0 | 2976 | 0 | 3 | 0 | | NaN | 0 | 0.992 | 0 | NaN | NaN | 0 | NaN
|
|---|
| yst08r | 0 | 77 | 279 | 10644 | 0 | 11 | 14 | | 0 | 0 | 0.9928178 | 0 | -0.0135444 | 0 | 0 | 0
|
|---|
| yst09g | 42 | 7 | 173 | 15778 | 6 | 1 | 7 | | 0.1953488 | 0.8571429 | 0.9995565 | 0.1891892 | 0.4061377 | 0.4615385 | 0.8571429 | 0.6593407
|
|---|
| yst10m | 0 | 0 | 0 | 5000 | 0 | 0 | 0 | | NaN | NaN | 1 | NaN | NaN | NaN | NaN | NaN
|
|---|
|
|
|---|
| Fly
| 0 | 512 | 671 | 41817 | 0 | 79 | 51 | | 0 | 0 | 0.9879043 | 0 | -0.0138211 | 0 | 0 | 0
|
|---|
| Human
| 210 | 1961 | 4909 | 281920 | 22 | 252 | 276 | | 0.0410236 | 0.0967296 | 0.9930922 | 0.029661 | 0.0521165 | 0.0738255 | 0.080292 | 0.0770587
|
|---|
| Mouse
| 166 | 657 | 1473 | 53204 | 20 | 90 | 78 | | 0.1012813 | 0.2017011 | 0.9878019 | 0.0722997 | 0.1247729 | 0.2040816 | 0.1818182 | 0.1929499
|
|---|
| Yeast
| 178 | 362 | 1056 | 59404 | 21 | 41 | 54 | | 0.1442464 | 0.3296296 | 0.993943 | 0.1115288 | 0.2076962 | 0.28 | 0.3387097 | 0.3093548
|
|---|
| Total
| 554 | 3492 | 8109 | 436345 | 63 | 462 | 459 | | 0.0639501 | 0.1369254 | 0.9920607 | 0.045578 | 0.0815315 | 0.1206897 | 0.12 | 0.1203448
|
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