News:
CMfinder software
download
is available now.
You need help adjusting the parameters of CMfinder? Please read the
manual
. Questions?
send mail
You can run CMfinder using 2 sets of parameters at one time
First configuration:
Number of stem-loops
1
2
3
Number of motifs
<10
Minimum length of motif
>15
Maximum length of motif
<150
Number of Candidates
<100
Expected fraction of sequences
containing the motif
0~1
Second configuration:
Number of stem-loops
1
2
3
Number of motifs
< 10
Minimum length of motif
> 15
Maximum length of motif
< 150
Number of Candidates
< 100
Expected fraction of sequences
containing the motif
0~1
Paste Sequences (*) in
FastA Format
Please limit your dataset to
4~60 sequences with length < 500bp
Or Upload a FastA file (*):
Post process options:
Merge motifs
Remove Redundant motifs
Output compression Options:
zip archive
gzipped tar ball
Your email address where results will be sent to
Press
to submit information, or
to default parameters.
